Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015831489.1_cds_XP_016504536.1_17970
CDS Infomation

[gene=LOC107822498] [db_xref=GeneID:107822498] [protein=protein SABRE-like] [protein_id=XP_016504536.1] [location=join(103..1675,2117..2217,5256..5612,5769..5887,6087..6336,8148..8372,9663..9818)] [gbkey=CDS]
Sequence

ATGAGAAACTACATTCATGGAAACACCTCCTTATATTTTTCTGAGTCCCAATGGAATATT
CTTGCCAGTACTGATCCTTATGAAAAGTCTGACAAGCTTCAGATAAGATCTGGGTATATG
GAACTCCAGCAGTCAGATGGCCGCGTTTATTGTTTTGCAAAGAAGTTCAAGATTCTAGTG
AGCAGCTTGGATAGCTTGTTGAAGAACTCCAACTTAAAGCGTCCATCTGGCTTTTCCTGT
ACTTTCATAGAGGCCCCGGCCTTTAGTCTTGAAGTGATAATGGAGTGGGAATGTGATTCT
GGAAACCCTCTAAACCATTATTTATTTGCATTTCCCAGTGAAGGAGTGCCTCGTGAAAAA
GTTTATGATCCATTTAGATCAACTTCTCTGTCACTACGGTGGAATTTGTTGCTTAGGCCC
TCTCTTCCCATTCATGATAATCAGTCAAGCTTATGTGCAGTGGGTGATCAGGGTGCCTTG
GATGCAGCTGGTTGTGGTGCAACGAAGCCAGATAGCTTGTCAGTTTCTCCAACACTAAAA
CTTGGTCCTCATGATTTGGCATGGATACTGAAATTCTGGAGCTTAAATTATAATCCGCCT
CACAAATTGCGGTCTTTTTCTAGGTGGCCACGTTTTGGAATACCGAGAGTTCCTAGATCT
GGCAATCTTTCATTAGACAAGGTGATGACAGAATTTATGTTCAGAGTTGATGCCACACCA
GCATGCATAAGGCATATGCCTTTAGACGATGATGACCCAGCAAAGGGGCTGACATTTTCT
ATGACTAAATTAAAATATGAACTTTATTATGGCCGAGGAAAGCAAAAATACACCTTTGAG
AGCAAGCGTGACACTCTTGATCTTGTGTACCAGGGTCTTGACCTCCACATGCCTAAGGCA
TTTATAAATAGAGATGATGATAGCAGTGTTGCAAAAGTAGTTAAAATGACTAGGAAAACA
TCACAATCTGCATCAACAGAAAGGTCTTCTAACGATAAAACTAGCAGTGTGAGCAGCAGC
ATGGAGAGACAGCGTGATGATGGGTTTCTTTTATCATCTGAGTATTTTACAATCAGAAGG
CAAGCCCCAAAAGCTGACCCAGATAGGTTGTTGGCGTGGCAAGAAGCTGGTAGGAGAAAT
CTGGAGATGACATATGTGAGATCTGAGTTTGAAAATGGGAGTGAAAGTGATGACCATACA
AGATCTGACCCAAGTGACGATGATGGATATAATGTAGTGATCGCTGATAATTGTCAGCGT
ATCTTTGTCTATGGTCTAAAGCTTTTGTGGACACTTGAGAATAGAGATGCAGTTTGGTCT
TGGGTAGGTGGAATATCTAAGGCTTTTGAATCTCCAAAACCATCTCCTTCTAGGCAATAT
GCCCAAAGAAAGTTGCTGGAGGATAGTGAGGTAATTGATAGAACTGAATTACCTCAAGAT
GATATCCAGAAGTCTCCAGTTAGTCATTGTGCAAGCTCCTCTTCTCCACAACACGCGAGG
CCATCAAAAGCACAAGTAGAATCACCTCCATCAAGTGAAGTTAAAGTAGAAACTCTTCCA
TCCAGTTCCGCTGCAAAGCTTGCCAACATTGAAGACTGTGAGGGGGAGGGCACTCGCCAT
TTCATGGTCAATGTCATTGAACCACAATTCAATCTTCACTCAGAAGATGCAAATGGTAGA
TTTCTGTTAGCTGCTGTCAGTGGCCGTGTTTTAGCTCGTTCATTCCATTCAGTTCTTTCC
ATTGGCTATGAAGTGATTGAACAAGCTCTAGGTGGAGGAAATGTTCAAATTCGTGAATCT
CAACCTGAAATGACATGGAATCGCATGGAGTACTCTGTGATGTTAGAACATGTGCAGGCA
CATGTTGCCCCAACTGACGTAGATCCAGGGGCTGGACTGCAGTGGCTTCCTAAAATTCGG
AGAAGCTCACCGAAAGTGAAGCGCACTGGAGCTTTACTGGAGAGAGTTTTTATGCCTTGT
GATATGTACTTCCGCTATACTAGGCATAAAGGTGCAACCGCAGACTTGAAGGTGAAACCT
TTGAAGGAGCTTTCATTCAATTCACATAATATAACAGCAACAATGACATCCCGCCAGTTC
CAAGTTATGCTAGATGTGTTGACCAATCTTCTATTTGCCCGGCTTCCAAAGCCTCGAAAA
GTTAGCCTGTCATATCCGGCAGGTGACGATGAAGATGTTGAAGAGGAGGCTGATGAAGTT
GTACCTGATGGTGTTGAAGAAGTAGAACTGGCAAGAGTGAACCTTGAACAGAAAGAAAGA
GCGCAGAAGTTGATCCAGGATGATATTAGGAAATTATCTCTTTATAATGATGCATCTGTG
GACAGGAACCCAGTAAAGGAAGGCGATCTTTGGATTATTAGTGGGGGAAGGTCCATTTTG
GTGCAAAGACTGAAGAAAGAGCTACTAAATGCTCAAAAATCCAGAAAAGTAGCATCTGCA
TCTCTGAGGATGGCTCTACAGAAAGCTGCACAGCTCCGATTGATGGAGAAGGAAAAGAAC
AAAAGTCCTTCTTGTGCTATGCGCATCTCTTTGCAAATTAATAAAGTAGTTTGGAGCATG
CTTGTGGACGGAAGATCATTTGCTGAAGCTGAGATAAATGATATGATATATGATTTTGAC
CGTGATTACAAAGATGTTGGGGTTGCTAAATTCACAACAAAATATTTTGTTGTGAGAAAC
TGCTTACCAAATGCCAAGTCTGATATGCTTCTATCAGCATGGAATCCTCCTACTGAATGG
GGAAAGTATGCAACAATTTAA

Peptide Sequence

PEP ID

XP_016504536.1
PEP Infomation

PREDICTED: protein SABRE-like [Nicotiana tabacum]
Sequence

MRNYIHGNTSLYFSESQWNILASTDPYEKSDKLQIRSGYMELQQSDGRVYCFAKKFKILV
SSLDSLLKNSNLKRPSGFSCTFIEAPAFSLEVIMEWECDSGNPLNHYLFAFPSEGVPREK
VYDPFRSTSLSLRWNLLLRPSLPIHDNQSSLCAVGDQGALDAAGCGATKPDSLSVSPTLK
LGPHDLAWILKFWSLNYNPPHKLRSFSRWPRFGIPRVPRSGNLSLDKVMTEFMFRVDATP
ACIRHMPLDDDDPAKGLTFSMTKLKYELYYGRGKQKYTFESKRDTLDLVYQGLDLHMPKA
FINRDDDSSVAKVVKMTRKTSQSASTERSSNDKTSSVSSSMERQRDDGFLLSSEYFTIRR
QAPKADPDRLLAWQEAGRRNLEMTYVRSEFENGSESDDHTRSDPSDDDGYNVVIADNCQR
IFVYGLKLLWTLENRDAVWSWVGGISKAFESPKPSPSRQYAQRKLLEDSEVIDRTELPQD
DIQKSPVSHCASSSSPQHARPSKAQVESPPSSEVKVETLPSSSAAKLANIEDCEGEGTRH
FMVNVIEPQFNLHSEDANGRFLLAAVSGRVLARSFHSVLSIGYEVIEQALGGGNVQIRES
QPEMTWNRMEYSVMLEHVQAHVAPTDVDPGAGLQWLPKIRRSSPKVKRTGALLERVFMPC
DMYFRYTRHKGATADLKVKPLKELSFNSHNITATMTSRQFQVMLDVLTNLLFARLPKPRK
VSLSYPAGDDEDVEEEADEVVPDGVEEVELARVNLEQKERAQKLIQDDIRKLSLYNDASV
DRNPVKEGDLWIISGGRSILVQRLKKELLNAQKSRKVASASLRMALQKAAQLRLMEKEKN
KSPSCAMRISLQINKVVWSMLVDGRSFAEAEINDMIYDFDRDYKDVGVAKFTTKYFVVRN
CLPNAKSDMLLSAWNPPTEWGKYATI

Transcript Sequence

Gene sequence data has not been registered.